\contentsline {section}{\numberline {1}基本环境的配置}{3}{section.1}% 
\contentsline {subsection}{\numberline {1.1}虚拟机安装}{3}{subsection.1.1}% 
\contentsline {subsection}{\numberline {1.2}操作系统的安装}{3}{subsection.1.2}% 
\contentsline {subsection}{\numberline {1.3}虚拟机的导入}{3}{subsection.1.3}% 
\contentsline {subsubsection}{\numberline {1.3.1}一个已经配置好的虚拟环境}{3}{subsubsection.1.3.1}% 
\contentsline {subsection}{\numberline {1.4}虚拟环境的使用}{3}{subsection.1.4}% 
\contentsline {subsubsection}{\numberline {1.4.1}虚拟环境的备份}{3}{subsubsection.1.4.1}% 
\contentsline {section}{\numberline {2}本地机器上lammps的安装}{3}{section.2}% 
\contentsline {subsection}{\numberline {2.1}lammps的预编译包手动安装}{4}{subsection.2.1}% 
\contentsline {subsubsection}{\numberline {2.1.1}下载lammps}{4}{subsubsection.2.1.1}% 
\contentsline {subsubsection}{\numberline {2.1.2}解压lammps}{4}{subsubsection.2.1.2}% 
\contentsline {subsubsection}{\numberline {2.1.3}更新系统}{4}{subsubsection.2.1.3}% 
\contentsline {subsubsection}{\numberline {2.1.4}安装依赖的软件包}{4}{subsubsection.2.1.4}% 
\contentsline {subsubsection}{\numberline {2.1.5}进入../src文件夹进行编译}{5}{subsubsection.2.1.5}% 
\contentsline {subsubsection}{\numberline {2.1.6}添加路径}{5}{subsubsection.2.1.6}% 
\contentsline {subsubsection}{\numberline {2.1.7}运行测试文件}{5}{subsubsection.2.1.7}% 
\contentsline {subsection}{\numberline {2.2}lammps的预编译包自动安装}{5}{subsection.2.2}% 
\contentsline {subsection}{\numberline {2.3}lammps的源代码编译安装}{6}{subsection.2.3}% 
\contentsline {subsection}{\numberline {2.4}Voronoi 函数的编译}{6}{subsection.2.4}% 
\contentsline {subsubsection}{\numberline {2.4.1}下载Voironoi++}{6}{subsubsection.2.4.1}% 
\contentsline {subsubsection}{\numberline {2.4.2}编译Voronoi++}{6}{subsubsection.2.4.2}% 
\contentsline {subsubsection}{\numberline {2.4.3}lammps中启用新编译函数}{6}{subsubsection.2.4.3}% 
\contentsline {subsubsection}{\numberline {2.4.4}编译lammps}{6}{subsubsection.2.4.4}% 
\contentsline {subsection}{\numberline {2.5}Peri 函数的编译}{6}{subsection.2.5}% 
\contentsline {section}{\numberline {3}Linux系统软件环境介绍}{6}{section.3}% 
\contentsline {subsection}{\numberline {3.1} 开源社区}{6}{subsection.3.1}% 
\contentsline {subsection}{\numberline {3.2}稳定可用的软件版本}{6}{subsection.3.2}% 
\contentsline {subsubsection}{\numberline {3.2.1}操作系统}{6}{subsubsection.3.2.1}% 
\contentsline {subsubsection}{\numberline {3.2.2}语言编译环境}{7}{subsubsection.3.2.2}% 
\contentsline {subsubsection}{\numberline {3.2.3}业务软件}{7}{subsubsection.3.2.3}% 
\contentsline {section}{\numberline {4}计算服务器的使用方法}{7}{section.4}% 
\contentsline {subsection}{\numberline {4.1}语言环境}{7}{subsection.4.1}% 
\contentsline {subsection}{\numberline {4.2}授权管理}{7}{subsection.4.2}% 
\contentsline {subsection}{\numberline {4.3}应用软件}{7}{subsection.4.3}% 
\contentsline {subsection}{\numberline {4.4}文件目录管理}{7}{subsection.4.4}% 
\contentsline {section}{\numberline {5}甘肃计算中心集群的使用方法}{7}{section.5}% 
\contentsline {subsection}{\numberline {5.1}语言环境}{7}{subsection.5.1}% 
\contentsline {subsection}{\numberline {5.2}应用软件}{8}{subsection.5.2}% 
\contentsline {subsection}{\numberline {5.3}文件目录管理}{8}{subsection.5.3}% 
